課程資訊
課程名稱
基因體學
Genomics 
開課學期
103-2 
授課對象
生命科學院  生命科學所  
授課教師
丁照棣 
課號
LS5080 
課程識別碼
B21EU2240 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
星期四@,5,6(~14:10) 
上課地點
生科419 
備註
本課程以英語授課。必須先修習過遺傳學。
總人數上限:30人 
Ceiba 課程網頁
http://ceiba.ntu.edu.tw/1032Genomics 
課程簡介影片
 
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課程概述

Recent advances in genomics have significantly revolutionized the ways which we do science in the 21st century. With the completion of the human genome, the new genome technologies have transformed our ability to understand the structure and function of genomes and have enabled scientists to explore the genomes of multicellular organisms. This course is designed to introduce undergraduate students, who are interested in this exciting and rapidly evolving field, the basic knowledge of genome and the state-of-the-art genome technologies. The lectures will cover an introduction on genome projects, sequencing technologies, genetic variation, transcriptome, proteomics, functional genomics, evolutionary genomics, metagenomics and epigenomics. Additional projects will be assigned to students to full fill the course requirements. 

課程目標
The aim for this course is to provide students an up-to-date knowledge in genome science at the introductory level and act as a bridging course to the more advanced levels. 
課程要求
必須先修習過遺傳學 
預期每週課後學習時數
 
Office Hours
備註: 8-10AM, Mondays 
指定閱讀
 
參考書目
Introduction to Genomics by Arthur M. Lesk (2nd Edition, Oxford University Press, 2011)

A Primer of Genome Science by G. Gibson and S. V. Muse (3rd Edition, Sinauer, 2009)
 
評量方式
(僅供參考)
   
課程進度
週次
日期
單元主題
Week 1
2/26  [Lecture] Introduction 
Week 2
3/05  [Homework] History of Genomics (Read the original paper)* 
Week 3
3/12  [Lecture] Genome Project
[Activity] 3-min talk: the original papers on Genomics 
Week 4
3/19  [Lecture/discussion] Sequencing Technologies 
Week 5
3/26  [Lecture] Genome Annotation
[Activity] Simple Annotation Problem Set 
Week 6
4/02  Spring Break 
Week 7
4/09  Gene Expression and Transcriptome
[Activity] Annotation project I  
Week 8
4/16  SNPs and Variation
[Activity] Annotation project II  
Week 9
4/23  Cancer Genomics
[Activity] Annotation project III  
Week 10
4/30  [Activity] Genetic testing
Homework: Annotation project IV  
Week 11
5/07  Functional Genomics
Homework: Annotation project V
 
Week 12
5/14  Homework: Annotation project VI 
Week 13
5/21  Student’s presentation slides due  
Week 14
5/28  Student Presentation (15 min per slot) 
Week 15
6/04  Proteomics – protein identification, annotation and protein interactomics
Full draft of term paper due  
Week 16
6/11  Revision of term paper  
Week 17
6/18  Final version of term paper due